species distribution modeling

Operationalizing expert knowledge in species’ range estimates using diverse data types

Estimates of species’ ranges can inform many aspects of biodiversity research and conservation-management decisions. Many practical applications need high-precision range estimates that are sufficiently reliable to use as input data in downstream …

Talk: Delineating parapatric ranges using species distribution models and support vector machines: An example with three-toed sloths (Bradypus)

Despite growing understanding that biotic interactions may impose important constraints on distributional limits, species distribution modeling (SDM) applications typically focus on abiotic variables without explicitly accounting for biotic …

Poster: Improving species range estimates for an arboreal species group with a parapatric distribution

Using support vector machines to mask out biotically unsuitable areas improves species range estimates for *Bradypus*.

Talk: Using SVMs to delineate parapatric ranges: An example with three-toed sloths (Bradypus)

Species distribution modeling (SDM) techniques are a common tool for estimating species ranges. These models typically rely only only on abiotic variables without accounting for biotic interactions, despite the fact that these interactions may impose …

Thresholding species distribution models

Inspiration for this post Conservation is often the main motivation behind studying where a species lives – having a model of a species’ range can help scientists assess whether it is at risk of extinction, designate protected regions to preserve its habitat, and study potential impacts of human activity. When we create species distribution models using common methods like Maxent, the result is a map of predicted habitat suitability or probability of species presence, such as the one below.

Converting alpha hulls to spatial objects

Inspiration for this post In species distribution modeling, one of the key steps requires the researcher to select a “background region” for the species, i.e. a region over which a machine learning model will compare the environment of the “background points” with the environment at points where the species is known to occur. The key to selecting this region is to pick an area where the species could occur but hasn’t necessarily been observed – for example, you don’t want to include an area separated from the rest of the range by a big mountain range that you don’t believe the organism could cross, but you do want to include a range of potential environments.

Talk: Using SVMs to model ranges of congeneric sloth species

Species distribution modeling (SDM) techniques are a common tool for estimating species ranges. These models typically rely only only on abiotic variables without accounting for biotic interactions, despite the fact that these interactions may impose …

Distribution modeling of Bradypus

Species distribution modelling of *Bradypus variegatus*, *B. tridactylus*, and *B. torquatus*.